PhysiBoSSv2-EMEWS: A C++ repository from Barcelona Supercomputing Center, Life Sciences department - Barcelona Supercomputing Center, Life Sciences department

EMEWS project template

You have just created an EMEWS project.

This project is compatible with swift-t v. 1.3+. Earlier versions will NOT work.

The project consists of the following directories:

EMEWS-PhysiBoSSa/
  data/
  ext/
  etc/
  python/
    test/
  R/
    test/
  scripts/
  swift/
  README.md

The directories are intended to contain the following:

data - model input etc. data
etc - additional code used by EMEWS
ext - swift-t extensions such as eqpy, eqr
python - python code (e.g. model exploration algorithms written in python)
python/test - tests of the python code
R - R code (e.g. model exploration algorithms written R)
R/test - tests of the R code
scripts - any necessary scripts (e.g. scripts to launch a model), excluding scripts used to run the workflow.
swift - swift code

Use the subtemplates to customize this structure for particular types of workflows. These are: sweep, eqpy, and eqr.