Pinned Repositories
30-Days-Of-JavaScript
30 days of JavaScript programming challenge is a step-by-step guide to learn JavaScript programming language in 30 days. This challenge may take more than 100 days, please just follow your own pace.
algorithm
Analysis-Tutorials
bioinformatic analysis tutorials and pipelines
anchor
:anchor: Find bimodal, unimodal, and multimodal features in your data
ATAC-seq
Basic workflow for ATAC-seq analysis
atac-seq-pipeline
ENCODE ATAC-seq pipeline
auto_lymph
Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
bonvoyage
:triangular_ruler: Transform percentage-based units into a 2d space to evaluate changes in distribution with both magnitude and direction.
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
CircSplice
CircSplice
buzhizhang121's Repositories
buzhizhang121/Analysis-Tutorials
bioinformatic analysis tutorials and pipelines
buzhizhang121/30-Days-Of-JavaScript
30 days of JavaScript programming challenge is a step-by-step guide to learn JavaScript programming language in 30 days. This challenge may take more than 100 days, please just follow your own pace.
buzhizhang121/algorithm
buzhizhang121/ATAC-seq
Basic workflow for ATAC-seq analysis
buzhizhang121/atac-seq-pipeline
ENCODE ATAC-seq pipeline
buzhizhang121/auto_lymph
Predicting gastric cancer outcome from resected lymph node histopathology images using deep learning
buzhizhang121/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
buzhizhang121/CLAM
CLIP-seq Analysis of Multi-mapped reads
buzhizhang121/CLAM_ENCODE_Snakemake
Snakemake pipeline for running CLAM on ENCODE eCLIP data
buzhizhang121/DaPars2
Dynamics analysis of Alternative PolyAdenylation from RNA-seq
buzhizhang121/DSC
Deep Splicing Code: Classifying Alternative Splicing Events Using Deep Learning
buzhizhang121/eclip
buzhizhang121/eKLIPse
a tool for predicting mitochondrial DNA deletions using soft-clipping
buzhizhang121/GENTRL
Generative Tensorial Reinforcement Learning (GENTRL) model
buzhizhang121/HCC_Prognostic
Exploring prognostic indicators in pathological images of hepatocellular carcinoma based on deep learning
buzhizhang121/ifnar_epigenome
Processing and analysis scripts for Xu Qiu manuscript
buzhizhang121/mexpress
MEXPRESS is a data visualization tool designed for the visualization of TCGA expression, DNA methylation and clinical data.
buzhizhang121/MToolBox
A bioinformatics pipeline to analyze mtDNA from NGS data
buzhizhang121/MTseeker
mitochondrial variant analysis tools
buzhizhang121/OncoSplicing
buzhizhang121/OpenMS
The codebase of the OpenMS project
buzhizhang121/ORQAS
ORF Quantification pipeline for Alternative Splicing
buzhizhang121/PASTA
buzhizhang121/proActiv
Estimation of Promoter Activity from RNA-Seq data
buzhizhang121/proactivWorkflow
proActiv workflow: Identifying active and alternative promoters from RNA-Seq data
buzhizhang121/RNA_editing
buzhizhang121/RNAEditingIndexer
A tool for the calculation of RNA-editing index for RNA seq data
buzhizhang121/SUPPA
SUPPA2: Fast quantification of differential splicing
buzhizhang121/ThyNet
This repository contains source code for the paper "Deep learning-based artificial intelligence assists in thyroid nodule management: a multi-center, diagnostic study"
buzhizhang121/TISMO_data
These are the sources codes to search, download, and process data for TISMO database