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pre-processing: Snakemake pipelines used for analyze RNA-seq data from different sources
- HMF
- TCGA
- Debio PDX
- Human cancer cell lines
Conda environment for snakemake: snakemake_env.yaml
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analysis: R codes used for analysis of pre-processed files
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figures: html files including figures in the paper
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sources: source data for generating figures in the paper
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R_environment.yml: R packages used to analyze data
Contact: bhinjh007@gmail.com