/clade-finder

Determines Y-Haplogroup Clade From Positive and Negative SNPs

Primary LanguagePythonMIT LicenseMIT

clade-finder

Determines Y-Haplogroup Clade From Positive and Negative SNPs

Installation

install pip3

Do not install pytabix using the --user paradigm. If you do, it will not be accessible by the apache www-data user. Instead, use sudo as below:

sudo pip3 install pytabix

#install pysam and pyvcf sudo apt-get install python3-pysam sudo apt-get install python3-pyvcf