c5sire

Data scientist with a biological and agricultural background.

Cologne, Germany

Pinned Repositories

ace2fastq
Docs
Language:R0 2 00
API
Repository for version control of the BrAPI specifications
Language:Shell0 2 00
appstat
Apps for teaching statistics
Language:R0 2 00
bdal
Language:HTML0 2 00
bdal2
Language:R0 2 00
BiocStyle
Issues and pull requests for BiocStyle should go here.
Language:TeX0 2 00
biomart2
Language:R0 3 01
bionitio-r
Demonstrating best practices for bioinformatics command line tools
Language:R0 1 00
brapigen
Language:R1 3 00
datacheck
Tools for checking data consistency
Language:HTML4 5 76

c5sire's Repositories

c5sire/brapigen
Language:R1 3 00
c5sire/ace2fastq
Docs
Language:R0 2 00
c5sire/API
Repository for version control of the BrAPI specifications
Language:Shell0 2 00
c5sire/bionitio-r
Demonstrating best practices for bioinformatics command line tools
Language:R0 1 00
c5sire/brapiTS
BrAPI Test Server
Language:R2 01
c5sire/brapiui
Language:R2 01
c5sire/brapix
Language:R2 0
c5sire/BSgenome.phix174.NCBI.NC001422
Website
Language:R1 0
c5sire/CoSSA
Comparative Subsequence Sets Analysis (CoSSA) workflows to identify haplotype specific SNPs linked to a trait of interest from Whole Genome Sequencing data
Language:Shell1 0
c5sire/Craft-an-AutoGPT-Code-Generation-AI-Instrument-Leveraging-Rust-and-GPT-4
c5sire/cv_reformatter
Takes your CV, a template and optionally an example and reformats the CV to the new template.
Language:JavaScript
c5sire/dekupl-joinCounts
Join multiple k-mer abundance files into a single matrix.
Language:C1 0
c5sire/docker
1 0
c5sire/duckdb
DuckDB is an in-process SQL OLAP Database Management System
Language:C++1 0
c5sire/edu-crew
c5sire/Engineering-Cognitive-AI-Agents
Building LLM-Powered Agents, Published by Packt
Language:Jupyter Notebook
c5sire/GDSC-7
This is the official GDSC repo with all of the source code presented in the video tutorials
Language:Jupyter Notebook0 0
c5sire/JuliaDataScience
Data Science in Julia course for JuliaAcademy.com, taught by Huda Nassar
c5sire/kamix
Index and query k-mer matrices in BGZF
Language:C1 0
c5sire/kmerbase
1 0
c5sire/kmerize
Website
Language:R1 5
c5sire/micrograd
A tiny scalar-valued autograd engine and a neural net library on top of it with PyTorch-like API
Language:Jupyter Notebook0 0
c5sire/pymc-resources
PyMC educational resources
Language:Jupyter Notebook0 0
c5sire/quipu
Language:R2 01
c5sire/RepData_PeerAssessment1
Peer Assessment 1 for Reproducible Research
Language:HTML2 0
c5sire/rhino
Build high quality, enterprise-grade Shiny apps at speed
c5sire/rust-github-demo
This is for demoing features of GitHub
Language:Makefile
c5sire/snake-game
1 0
c5sire/test1234
2 0
c5sire/TuringModels.jl
Implementations of the models from the Statistical Rethinking book with Turing.jl
Language:Julia0 0