BioVis Contest 2013
3-D renderer switch to Pymol from PyMOL.
- IEEE BioVis 2013 Main Tool Example
- IEEE BioVis 2013 3D Motion Example
- IEEE BioVis 2013 Interactive Trend Image Example
- Pymol 1.6
- PySide
- PyOpenGL
- MySQLdb
Ubuntu 12.04 and up
If using either Macintosh or Windows:
- Download Virtual Box (https://www.virtualbox.org/), or any equivalent piece of software (Parallels Desktop, VMWare, etc.)
- Download Ubuntu Desktop (http://www.ubuntu.com/download), making sure it is version 12.04 or newer
- Follow the instructions (https://www.virtualbox.org/manual/ch02.html) to setup the virtual machine
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Download the code by either:
- git clone https://github.com/cadmuxe/biovis .
- Downloading the zip: https://github.com/cadmuxe/biovis/archive/master.zip
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From Ubuntu, launch a terminal window
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Execute the following commands in the terminal window (copy and paste):
- sudo apt-get update
- sudo apt-get install build-essential python2.7 freeglut3 libgl1-mesa-glx libglu1-mesa python-tk python-pmw python-pip python2.7-dev python-pyside mysql-client python-mysqldb pymol cmake qt4-default python-qt4* git
- sudo pip install --upgrade pip
- sudo pip install numpy pyopengl
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change to the fixingTIM directory and run: python ./qt.py