gchromVAR installation

[Renfang2019]

Dear Caleb,Thank you very much for the help. I add the line for colname and it worked! so I am in the step of importbedscore. It said there is no function of importbedscore so I tried to install the package again and it gave me this error. Any other way to install it? Thank you !

devtools::install_github("caleblareau/gchromVAR")
Downloading GitHub repo caleblareau/gchromVAR@master
Skipping 1 packages not available: chromVARmotifs
Installing 3 packages: chromVARmotifs, motifmatchr, RSQLite
Installing packages into ‘C:/Users/rsong/Documents/R/win-library/3.5’
(as ‘lib’ is unspecified)
Error: Failed to install 'gchromVAR' from GitHub:
(converted from warning) package ‘chromVARmotifs’ is not available (for R version 3.5.1)

[Renfang2019]

I tried different computer and it installed gchromVAR nicely! Thank you.

[julirsch]

Hi @Renfang2019,

Out of curiosity, did you switch to OSX or Linux?

Jacob

[Renfang2019]

Yes, I used the Windows yesterday and I tried on apple today. Dr. Renfang Song Taylor Assistant Professor Department of Biology College of Science and Mathematics SOUTHWEST BAPTIST UNIVERSITY 1600 University Ave. | Bolivar MO 65613 Room: Wheeler Science Center 114D OFFICE 417.328.1669 rtaylor@SBUniv.edu<mailto:cmarsch@SBUniv.edu> Follow us: Facebook<https://www.facebook.com/SBUniv> | Twitter<http://www.twitter.com/SBUniv> | Instagram[cid:0379be4a-e2eb-4685-943c-ba439fe5223c]<http://www.instagram.com/sbuniv> Proverbs 2:10-11.For wisdom will enter your heart, and knowledge will be pleasant to your soul. and understanding will guard you. 箴言2：10-11智 慧 必 入 你 心 ． 你 的 靈 要 以 知 識 為 美 . 謀 略 必 護 衛 你 ． 聰 明 必 保 守 你

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________________________________ From: Jacob Ulirsch <notifications@github.com> Sent: Thursday, July 25, 2019 6:32 AM To: caleblareau/gchromVAR <gchromVAR@noreply.github.com> Cc: Renfang Taylor <rtaylor@sbuniv.edu>; Mention <mention@noreply.github.com> Subject: Re: [caleblareau/gchromVAR] gchromVAR installation (#6) Hi @Renfang2019<https://github.com/Renfang2019>, Out of curiosity, did you switch to OSX or Linux? Jacob — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub<#6?email_source=notifications&email_token=AMMOBOTZKO36R4OXEXDHPGTQBHWUBA5CNFSM4IGSUS42YY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOD22MFCA#issuecomment-515162760>, or mute the thread<https://github.com/notifications/unsubscribe-auth/AMMOBOTKH3WTIS4YAU5WOVDQBHWUBANCNFSM4IGSUS4Q>.