calico/romic

Issues

• Allow for transposing axes when creating a heatmap

  #81 opened 2 months ago by shackett
  0

• feature_pk and sample_pk not available in `plot_missing_values`

  #80 opened 2 months ago by shackett
  0

• tomic to matrix

  #78 opened 3 months ago by shackett
  0

• Feature or sample variables as numbers creates problems

  #73 opened 6 months ago by shackett
  0

• tomic_to drops unstructured data

  #74 opened 6 months ago by shackett
  0

• Feature and sample labels switched in heatmap

  #75 opened 6 months ago by shackett
  0

• Recreate a tidy_omic object from data + design

  #76 opened 6 months ago by shackett
  0

• update check_design

  #71 opened 8 months ago by shackett
  0

• Release new version to CRAN - 1.1.3

  #68 opened a year ago by shackett
  0

• Update GitHub Actions rtest and linting workflows

  #62 opened a year ago by shackett
  0

• CRAN testthat failures

  #66 opened a year ago by shackett
  0

• Update romic-package alias

  #63 opened a year ago by shackett
  0

• Refactor tests to match names of .R files

  #64 opened a year ago by shackett
  0

• Simplify manual labelling in heatmap

  #60 opened a year ago by shackett
  0

• Update GHA workflow to V2; pass R CMD check

  #57 opened a year ago by shackett
  0

• Add option to add_pcs which doesn't tag PCs with percent varex

  #53 opened 2 years ago by shackett
  0

• Add a function to pull out a specific table from a tidy or triple omics object

  #55 opened 2 years ago by shackett
  0

• Cryptic error in add_pcs

  #52 opened 2 years ago by shackett
  1

• Adding impute as a dependency will fail once it goes back to CRAN

  #26 opened 2 years ago by shackett
  1

• Update CRAN

  #47 opened 2 years ago by shackett
  0

• Add shape and alpha to plot_bivariate

  #48 opened 2 years ago by shackett
  0

• polygon edge not found in shiny heatmap

  #45 opened 2 years ago by shackett
  0

• add_pca_loadings is misnamed

  #32 opened 2 years ago by shackett
  0

• Add unstructured attributes as a list for tracking attributes like percent variance explained by each PC

  #43 opened 2 years ago by shackett
  0

• Add fraction of variance explained by PCs

  #42 opened 2 years ago by shackett
  0

• `add_pca_loadings` fails in new version of dplyr

  #39 opened 2 years ago by PMSeitzer
  1

• Error during plot_heatmap

  #37 opened 2 years ago by shackett
  0

• Add glue to coerce_to_classes

  #35 opened 2 years ago by shackett
  0

• check_triple_omic fails due to class conflicts when a tidy is converted to a triple if the primary keys are factors

  #33 opened 3 years ago by shackett
  0

• Add bookmarking for primary apps

  #22 opened 3 years ago by shackett
  1

• don't use downsample features if a heatmap has row facets

  #30 opened 3 years ago by shackett
  0

• heatmap debugging

  #28 opened 3 years ago by shackett
  0

• Try to speed up heatmap generation

  #24 opened 3 years ago by shackett
  0

• Add imputation to remove_missing_values

  #6 opened 3 years ago by shackett
  0

• Reducing heatmap data to 1 row/column causes an hclust error

  #13 opened 3 years ago by shackett
  2

• expose plotSaver options with ... and add a filename variable

  #20 opened 3 years ago by shackett
  0

• tag v1.0.0 release

  #19 opened 3 years ago by shackett
  0

• Readme - invalid URI

  #17 opened 3 years ago by shackett
  0

• Allow facets with multiple variables

  #12 opened 3 years ago by shackett
  1

• submit to CRAN - lint and check

  #15 opened 3 years ago by shackett
  0

• Remove exports to /tmp from examples

  #8 opened 3 years ago by shackett
  0

• Remove ' from romic's title

  #9 opened 3 years ago by shackett
  0

• Improve checking of primary key - foreign key equivalence

  #10 opened 3 years ago by shackett
  0

• Submit to CRAN

  #1 opened 3 years ago by shackett
  0

• Flow UI doesn't respect lasso method conditional panel

  #7 opened 3 years ago by shackett
  0

• add import option for wide data with header

  #4 opened 3 years ago by shackett
  0

• add shiny module tests

  #5 opened 3 years ago by shackett
  0

• Add additional dimensionality reduction approaches

  #3 opened 3 years ago by shackett
  0