Pinned Repositories
annualsurvey
Annual Faculty Survey
calkan.github.io
Alkan Lab website sandbox
cv
docwiki
Wiki page for some documentation of tools, including those developed by others
reflettermaker
Automated PDF generator for many recommendation letters
sonic
Some Organism's Nucleotide Information Container
tubitak-1001-basvuru
ARDEB/1001 Başvuru Formu Şablonu
tubitak-reports
LaTeX template for TUBITAK project reports
verifybam
calkan's Repositories
calkan/reflettermaker
Automated PDF generator for many recommendation letters
calkan/sonic
Some Organism's Nucleotide Information Container
calkan/docwiki
Wiki page for some documentation of tools, including those developed by others
calkan/tubitak-reports
LaTeX template for TUBITAK project reports
calkan/tubitak-1001-basvuru
ARDEB/1001 Başvuru Formu Şablonu
calkan/verifybam
calkan/annualsurvey
Annual Faculty Survey
calkan/calkan.github.io
Alkan Lab website sandbox
calkan/cv
calkan/reproducibility
sanity check scripts
calkan/FREEC
Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data
calkan/hitseq
calkan/lordfast
Sensitive and Fast Alignment Search Tool for Long Read sequencing Data
calkan/mam
Multiple alignment Manipulator
calkan/mrsfast
mrsFAST: micro-read substitution-only Fast Alignment Search Tool
calkan/ngscourses
Courses
calkan/pamir
Discovery and Genotyping of Novel Sequence Insertions in Many Sequenced Individuals
calkan/projectlibra
LIBRA: YOUR Genetic Filtering and Diagnosis Matching System
calkan/rust-mdbg
minimizer-space de Bruijn graphs (mdBG) for whole genome assembly
calkan/sonuc112e135
tubitak 1001 projesi sonuc raporu
calkan/TARDIS-BAM-NextFlow
Tool for automated and rapid discovery of structural variants
calkan/TARDIS-CRAM-NextFlow