What are the sizes of the BRCA and ACC Datasets

Question

What are the sizes of the BRCA and ACC Datasets

cannin opened this issue a year ago · 5 comments

Include the information as shown here:
https://pytorch-geometric.readthedocs.io/en/latest/cheatsheet/data_cheatsheet.html

Answer 1 · 2023-07-06T14:53:03.000Z

@Favourj-bit PyG sample data list.
https://docs.google.com/spreadsheets/d/1pBCHNLPAEjnR8lDXaH3yDtHeiyHjLgBan8Kuc6jfpvM/edit?usp=sharing

Answer 2 · 2023-07-06T15:44:43.000Z

@cannin @inoue0426
https://docs.google.com/spreadsheets/d/1YvuTu72ch41sr6rEM1XjkyyLPTRQZKkYtpBME5UsfXU/edit#gid=0

Given that it is a regression task, i did not know what to put under classes

Answer 3 · 2023-07-07T00:20:48.000Z

@Favourj-bit Looks good to me. Feel like over 1000 is enough as sample data. Maybe for further analysis, I want you to make a whole data model containing more diseases if possible.

Answer 4 · 2023-07-13T20:31:14.000Z

@Favourj-bit could you make another sheet on the spreadsheet with the following information:

cancer type
sample count
algorithm
mse
validation_split_type
full_training_time

Answer 5 · 2023-07-25T13:09:15.000Z

@cannin for the sample count here, should I list out the original sample size or the size gotten after preprocessing the dataset?