Pinned Repositories
ABBABABA-4AF
Calculate ABBA-BABA statistics from allele frequency data
ABBABABA_Sepsis
capoony.github.io
Minimal Mistakes Jekyll theme
CodeSnippets
DrosEU_pipeline
Bioinformatics pipeline for the generation and analysis of the DrosEU data of 2014.
DrosoMapping
DrosoNatThermPref
DrosophilaThermalPreference
GenomicsOfLarvalMalnutrition
PoolSNP
Heuristic SNP caller for pooled sequencing data
capoony's Repositories
capoony/DrosEU_pipeline
Bioinformatics pipeline for the generation and analysis of the DrosEU data of 2014.
capoony/PoolSNP
Heuristic SNP caller for pooled sequencing data
capoony/ABBABABA-4AF
Calculate ABBA-BABA statistics from allele frequency data
capoony/ABBABABA_Sepsis
capoony/capoony.github.io
Minimal Mistakes Jekyll theme
capoony/CodeSnippets
capoony/DrosoMapping
capoony/DrosoNatThermPref
capoony/DrosophilaThermalPreference
capoony/GenomicsOfLarvalMalnutrition
capoony/EfetchThePython
capoony/euc_qc
quality control shell scripts for mapping short-read sequencing data to distant reference genomes
capoony/In3RPayne_PopGenomics
capoony/Montenegrina_2023
capoony/npstat
Population genetics tests and estimators for pooled NGS data
capoony/picard
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
capoony/popgentools
Assorted scripts
capoony/SepsidABBABABA
capoony/uc3-drosophola-genetics
FAIRiCUBE drosophola-genetics Use Case
capoony/varscan
Variant calling and somatic mutation/CNV detection for next-generation sequencing data
capoony/WolbachiaEvolHist_2023