Pinned Repositories
BgeeDB_R
Source code of the R packge BgeeDB to use data from the Bgee database
EDSS_dep_framework
Integrated framework for EDSS deployment
intermediate-python-training
unix-first-steps-training
SIB First Steps with UNIX course
workshop-02quarto
In this repo you can find all material related to the R-Ladies Zürich meetup event 'Zero to Quarto' on 23.10.2023
arvados
An open source platform for managing and analyzing biomedical big data
azureml-examples
Official community-driven Azure Machine Learning examples, tested with GitHub Actions.
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
bgee_pipeline
Source code of the Bgee pipeline used to build the Bgee database
bioperl.github.io
The BioPerl Web site: http://bioperl.org
carissafletcher's Repositories
carissafletcher/BgeeDB_R
Source code of the R packge BgeeDB to use data from the Bgee database
carissafletcher/intermediate-python-training
carissafletcher/unix-first-steps-training
SIB First Steps with UNIX course
carissafletcher/workshop-02quarto
In this repo you can find all material related to the R-Ladies Zürich meetup event 'Zero to Quarto' on 23.10.2023
carissafletcher/arvados
An open source platform for managing and analyzing biomedical big data
carissafletcher/azureml-examples
Official community-driven Azure Machine Learning examples, tested with GitHub Actions.
carissafletcher/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
carissafletcher/bgee_pipeline
Source code of the Bgee pipeline used to build the Bgee database
carissafletcher/CovidCertificate-Documents
Documents related to covid certificate system in Switzerland
carissafletcher/cristina_arjun_carissa_assessment
carissafletcher/cromwell
Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
carissafletcher/enrichment-analysis-training
Course material for Enrichment analysis course by SIB
carissafletcher/Gallus_gallus_expr_advanced_all_conditions.tsv.gz
BGee_Bird_Project
carissafletcher/genozip
A modern compressor for genomic files (FASTQ, SAM/BAM/CRAM, VCF, FASTA, GFF/GTF/GVF, 23andMe...), up to 5x better than gzip and faster too
carissafletcher/git_demo
SIB ETH Training 1
carissafletcher/Introduction-to-Clinical-Bioinformatics
carissafletcher/ios-demo-app
PyTorch iOS examples
carissafletcher/latex2e
The LaTeX2e kernel
carissafletcher/luigi
Luigi is a Python module that helps you build complex pipelines of batch jobs. It handles dependency resolution, workflow management, visualization etc. It also comes with Hadoop support built in.
carissafletcher/matplotlib
matplotlib: plotting with Python
carissafletcher/MSA_Project
Sprint_3 Team Coding Project
carissafletcher/myapp
R Shiny ETH
carissafletcher/onnxruntime
ONNX Runtime: cross-platform, high performance ML inferencing and training accelerator
carissafletcher/pyshiny-vscode
R Shiny
carissafletcher/python-trainig
carissafletcher/shiny101
Tutorial Materials for "Building your First Web Apps with R Shiny" workshop
carissafletcher/STP_sprint3
carissafletcher/toil
A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.
carissafletcher/ucum
carissafletcher/yapf
A formatter for Python files