/landmark_extraction

Automated anatomical landmark extraction tool for NIfTI segmentations

Primary LanguagePython

landmark_extraction

Python code to automatically extract landarmarks for a structure of interest in a nifti segmentation.

The code finds the z-axis orientation from the segmentation header, and places three landmarks for each specified label. The landmarks are placed in the bottom, medium and top voxel labelled with the label of interest along the z-direction.