How to go from Geometry -> Mesh -> Forward -> Inverse -> EIT image
To make an image you need to install and make visible to Matlab:
- iso2mesh - add folder to matlab path. This contains useful tools for handling meshes in Matlab
- Mesher - add MATLAB folder to path. If you are using WSL to run the linux software on Windows, its better to have this in a windows folder that in ubuntu looks like
/mnt/c/Users/User/Mesher. This creates the FEM models from segmentations - Supersolver - add src directory. This runs the forward model and creates the jacobian
- Reconstruction - add src/matlab. This inverts the jacobian and creates images
- paraview - views the output vtk files
Each directory has examples, some of which is repeated here, so if something is not working then check within the specific directory for more info.