Code simulates the recorded activity of a population of neurons on a multi-electrode array. The design of these simulations incorporated realistic variations and noise characteristics seen in actual neural data. Designed for testing spike sorting algorithms.
Code and documention in process of being made more user-friendly for publication and use.
Paper will be posted on bioRxiv soon, a previous version is available in my dissertation: https://hdl.handle.net/2144/19751
Simulation code directory
- parameters are set by command line flags at the moment, will be updated to read/write json parameters files
make simtraces
Matlab code to analyze the results of spike sorting performed on simulated traces