catchambers

catchambers's Stars

• rstudio/cheatsheets

  Posit Cheat Sheets - Can also be found at https://posit.co/resources/cheatsheets/.

  Language:TeX5.9k1.8k

• rstudio/rmarkdown

  Dynamic Documents for R

  Language:R2.9k975

• adam-p/markdown-here

  Google Chrome, Firefox, and Thunderbird extension that lets you write email in Markdown and render it before sending.

  Language:JavaScript59.6k11.3k

• ESR-NZ/vcf_annotation_pipeline

  A Snakemake workflow to filter, annotate and prepare variant call format (VCF) data for scout using GATK4, SnpSift, VEP and genmod. Designed to be used after human_genomics_pipeline.

  Language:Python86

• samtools/bcftools

  This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html

  Language:C675240

• broadinstitute/palantir-workflows

  Utility workflows for the DSP hydro.gen team (formerly palantir)

  Language:WDL198

• xihaoli/STAARpipeline

  An R package for performing association analysis of whole-genome/whole-exome sequencing (WGS/WES) studies using STAARpipeline

  Language:R6120

• sirselim/VCF-DART_example_exomes

  A few example exomes in vcf format for testing the VCF-DART annotation and reporting tool

  3

• sirselim/diagnostics_exome_reporting

  Pipeline to filter whole exome vcf files and generate a report document for clinical diagnostics.

  Language:Shell1410

• helenahartmann/awesome-PhD

  All the resources I wish I knew when starting my PhD. This repository is aimed to be a living, constantly developing resource where everybody can contribute with new resources!

  43724

• danielecook/Awesome-Bioinformatics

  A curated list of awesome Bioinformatics libraries and software.

  3.2k616

• choishingwan/PRSice

  A software package for calculating, applying, evaluating and plotting the results of polygenic risk scores

  Language:C18588

• github/gitignore

  A collection of useful .gitignore templates

  162k83.1k

• cbodinge/LinearAlgebra

  C++ Library of Linear Algebra Classes and Functions

  Language:C++11