Pinned Repositories
cell2location
Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)
cking-portfolio
Homepage -> www.cathalgking.com
Random-scripts
Random scripts to handle and process bioinformatic data
SAGC_scRNAseq_workshop
SAGC single-cellRNAseq workshop
single-cell-RNA-seq-analysis
simple operations on single-cell-RNA-seq or spatial transcriptomics data
Spatial_Workshop_SAGC
iSEE
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
nichenetr
NicheNet: predict active ligand-target links between interacting cells
samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
seurat
R toolkit for single cell genomics
cathalgking's Repositories
cathalgking/single-cell-RNA-seq-analysis
simple operations on single-cell-RNA-seq or spatial transcriptomics data
cathalgking/cking-portfolio
Homepage -> www.cathalgking.com
cathalgking/Random-scripts
Random scripts to handle and process bioinformatic data
cathalgking/SAGC_scRNAseq_workshop
SAGC single-cellRNAseq workshop
cathalgking/Spatial_Workshop_SAGC