Pinned Repositories
ABAGAIL
The library contains a number of interconnected Java packages that implement machine learning and artificial intelligence algorithms. These are artificial intelligence algorithms implemented for the kind of people that like to implement algorithms themselves.
Animal_Shelter
bioinfo_stuff
data_wrangling_project
django_project
learning_bioinfo
machine_learning_project
NormalizeMets
:exclamation: This is a read-only mirror of the CRAN R package repository. NormalizeMets — Analysis of Metabolomics Data
parallel_for_bioinfo
R_moive_project
The data set is all movies since last century. Using R for exploratory data analysis.
cautree's Repositories
cautree/learning_bioinfo
cautree/awesome-nextflow
A curated list of nextflow based pipelines
cautree/bioinfo_stuff
cautree/parallel_for_bioinfo
cautree/bash-guide
A guide to learn bash
cautree/bioinfo_notes
cautree/bioinformatics-1
Code inspired by Bioinformatics Algorithms: an Active Learning Approach.
cautree/Bioinformatics-Workshops
Workshops presented by the Gladstone Bioinformatics Core
cautree/circlator
A tool to circularize genome assemblies
cautree/Complete-Bash-Shell-Scripting-
Code Repository for Complete Bash Shell Scripting; Published by Packt
cautree/DE-nf
cautree/DeepLearningNeanderthalIntrogression
Here I deposite input files and Jupyter notebooks on detecting Neanderthal introgression analysis
cautree/getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
cautree/groovy
Apache Groovy: A powerful multi-faceted programming language for the JVM platform
cautree/learning_vcf_file
Learning the Variant Call Format
cautree/machine-learning-resource
cautree/mlbookcamp-code
The code from the Machine Learning Bookcamp book and a free course based on the book
cautree/nextflow
nextflow
cautree/nextflow_cheatsheet
Tips for Nextflow and cheatsheet for channel operation
cautree/NextflowModules
UMCU Genetics Nextflow modules
cautree/pipelines-nextflow
A set of workflows written in Nextflow for Genome Annotation.
cautree/qa
cautree/quarto-rug-slc
Materials for the Reproducible publishing with Quarto talk for the Salt Lake City R Users Group (2023-03-20)
cautree/R-Bioinformatics-Cookbook
R Bioinformatics Cookbook, published by Packt
cautree/r-polars
Bring polars to R
cautree/test_CICD
cautree/Tn5bias
cautree/vsn-pipelines
A repository of pipelines for single-cell data in Nextflow DSL2
cautree/workflows-nextflow
Workflow management with Nextflow and nf-core
cautree/workflows-snakemake
One-day Snakemake workshop.