Pinned Repositories
docker-copier
Alpine-based Docker container for securely running the copier template rendering software
docker-snakemake
Dockerfiles to create best practice containers for running and developing Snakemake workflows
docker_images
A collection of useful Docker images I created and pushed to Docker Hub
metaseqlite
A Python 3 compatible version of the major features of metaseq, a framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
samflags
Command line utility written in NodeJS to decode SAM flags to explain what they mean.
snakemake-workflow-ref_genomes
Snakemake workflow for downloading Ensembl reference genomes for use in downstream bioinformatics analyses
cbp44's Repositories
cbp44/samflags
Command line utility written in NodeJS to decode SAM flags to explain what they mean.
cbp44/docker-copier
Alpine-based Docker container for securely running the copier template rendering software
cbp44/docker-snakemake
Dockerfiles to create best practice containers for running and developing Snakemake workflows
cbp44/docker_images
A collection of useful Docker images I created and pushed to Docker Hub
cbp44/snakemake-workflow-ref_genomes
Snakemake workflow for downloading Ensembl reference genomes for use in downstream bioinformatics analyses
cbp44/snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
cbp44/metaseqlite
A Python 3 compatible version of the major features of metaseq, a framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
cbp44/cbp44
cbp44/GLnexus
Scalable gVCF merging and joint variant calling for population sequencing projects
cbp44/hadatac
HADatAc: Human-Aware Data Acquisition Framework
cbp44/ontobio
python library for working with ontologies and ontology associations
cbp44/rna-seq-star-deseq2
RNA-seq workflow using STAR and DESeq2
cbp44/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
cbp44/snakemake-workflow-rna-seq
Snakemake workflow for performing an RNA-seq analysis
cbp44/snakemake-workflow-template
A cookiecutter template for a snakemake-workflow readme file
cbp44/ublock-origin-rules
Rules for uBlock Origin to make commonly used websites work in medium, hard and nightmare modes
cbp44/whyis
Whyis is a nano-scale knowledge graph publishing, management, and analysis framework.