ccl6

Pinned Repositories

asap_to_kite
CL python script to reformat CITEATAC fastqs for kite (kallisto | bustools) processing
Language:Python00
covid19-time-resolved
This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, Andrew J. Martins, William W. Lau, Nicholas Rachmaninoff, ..., John S. Tsang. "Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19" Cell (2021), In press.
Language:R00
sc_annotation
Language:Jupyter Notebook01
scg_lib_structs
Collections of library structure and sequence of popular single cell genomic methods
Language:HTML00
WGCNA_tutorial
A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
00
CellphoneDB
CellPhoneDB can be used to search for a particular ligand/receptor, or interrogate your own HUMAN single-cell transcriptomics data.
Language:Jupyter Notebook30552

ccl6's Repositories

ccl6/scg_lib_structs
Collections of library structure and sequence of popular single cell genomic methods
ccl6/sc_annotation
Language:Jupyter Notebook1
ccl6/WGCNA_tutorial
A step-by-step tutorial for Weighted correlation network analysis (WGCNA)
ccl6/asap_to_kite
CL python script to reformat CITEATAC fastqs for kite (kallisto | bustools) processing
ccl6/covid19-time-resolved
This repository consists of scripts and workflows used for generating results, figures, and tables published in the article: Can Liu, Andrew J. Martins, William W. Lau, Nicholas Rachmaninoff, ..., John S. Tsang. "Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19" Cell (2021), In press.