Pinned Repositories
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alphafold
Open source code for AlphaFold.
cq-intro-python
Calcul Québec training : Introduction to Programming with Python - PYT101
avail_wheels
List available wheels from CVMFS wheelhouse
wheels_builder
ccoulombe's Repositories
ccoulombe/cq-intro-python
Calcul Québec training : Introduction to Programming with Python - PYT101
ccoulombe/magic_clusters
Magic Clusters recipes for various workshops
ccoulombe/arcs
🌈Scaffold genome sequence assemblies using linked or long read sequencing data
ccoulombe/bcftools
This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html
ccoulombe/bitsandbytes
8-bit CUDA functions for PyTorch
ccoulombe/ColossalAI
Making large AI models cheaper, faster and more accessible
ccoulombe/dedalus
A flexible framework for solving PDEs with modern spectral methods.
ccoulombe/DeepSpeed-MII
MII makes low-latency and high-throughput inference possible, powered by DeepSpeed.
ccoulombe/faiss
A library for efficient similarity search and clustering of dense vectors.
ccoulombe/FastFold
Optimizing AlphaFold Training and Inference on GPU Clusters
ccoulombe/LongStitch
Correct and scaffold assemblies using long reads
ccoulombe/magic_infra
Magic Castle infrastructure for workshops
ccoulombe/mandrake
Mandrake 🌿/👨🔬🦆 – Fast visualisation of the population structure of pathogens using Stochastic Cluster Embedding
ccoulombe/ntLink
Minimizer-based assembly scaffolding and mapping using long reads
ccoulombe/Open3D-ML
An extension of Open3D to address 3D Machine Learning tasks
ccoulombe/planets
ccoulombe/PopPUNK
PopPUNK 👨🎤 (POPulation Partitioning Using Nucleotide Kmers)
ccoulombe/pp-sketchlib
Library of sketching functions used by PopPUNK
ccoulombe/python-novice-inflammation
Programming with Python
ccoulombe/rmm
RAPIDS Memory Manager
ccoulombe/stunning-carnival
ccoulombe/Tangelo
Tools developed for running end-to-end chemistry workflows on quantum computers and simulators.
ccoulombe/TEST
ccoulombe/test-jhbook
ccoulombe/thrift
Apache Thrift
ccoulombe/tigmint
⛓ Correct misassemblies using linked AND long reads
ccoulombe/VirSorter2
customizable pipeline to identify viral sequences from (meta)genomic data
ccoulombe/vllm
A high-throughput and memory-efficient inference and serving engine for LLMs
ccoulombe/will-cite
GNU Parallel will-cite
ccoulombe/WISDEM
Wind Plant Integrated System Design and Engineering Model