Issues
- 0
empty pdb directory
#40 opened by MJoosten - 1
- 4
Starfile writing via gemmi/ccpem-pipeliner
#4 opened by JatGreer - 0
Sort out het_metrics.log file
#37 opened by JatGreer - 2
Setup sphinx docs
#35 opened by JatGreer - 2
- 1
Test conformation sampling using waymarking without limiting to only the 1st .dcd file
#1 opened by JatGreer - 0
Update Parakeet to latest tagged version
#34 opened by JatGreer - 0
Add parallelisation for simulate utility
#29 opened by JatGreer - 0
plot_ctf incorrect CTF
#31 opened by MJoosten - 0
Roodmus v0.3.0 utilities
#28 opened by JatGreer - 1
Identify Parakeet config parameters which are not useful for SPA dataset generation
#27 opened by JatGreer - 1
pandas compatibility
#18 opened by MJoosten - 0
- 0
Refactor num_ugraphs to be implemented within analysis object. This resolves unnecessary matching of particles in all ugraphs in a metadata file.
#16 opened by JatGreer - 0
- 0
add CONTRIBUTING.md to repo
#14 opened by JatGreer - 1
- 1
Update plot formatting
#12 opened by JatGreer - 0
integration test for heterogeneity module
#33 opened by MJoosten - 1
Pytest fails in comparing dataframes
#32 opened by MJoosten - 4
check Thon rings with empty micrographs
#8 opened by JatGreer - 0
Particle distribution in micrographs
#7 opened by JatGreer - 0
determine particle radius script
#6 opened by JatGreer - 3
- 1
Look into cisTEM for micrograph simulation
#11 opened by JatGreer - 1
- 4
- 1
- 0
Parameters for noisy, radiation damaged, inelastic scattering-inclusive, fractionated dataset generation
#26 opened by JatGreer - 0
power spectra in synthetic data
#25 opened by JatGreer - 0
dose fractionation and beam induced motion
#24 opened by JatGreer - 0
inelastic scattering models
#23 opened by JatGreer - 0
MTF generation and e-/A^2/second dependence in implementation (also relation to DQE)
#22 opened by JatGreer - 0
CTF simulation
#21 opened by JatGreer - 0
Beam damage model and implementation
#20 opened by JatGreer - 0