cfbuenabadn

Postdoc at UChicago. PhD in Computational Biology from UC Berkeley. Alternative splicing in single cells.

UChicago

Pinned Repositories

sc_binary_splicing
Dataset analysis, simulations and figures from single cell splicing paper
Language:Jupyter Notebook41
psix
Language:Python147
YosefCode2
Repeal and replace TopHat (with STAR) in the pipeline.
Language:Jupyter Notebook30
sc_splicing_tools
Language:Python11
cfbuenabadn.github.io
Postdoctoral scholar at the University of Chicago
00
gtex-stm
Application of STM/SGoM models to GTEx data
Language:Jupyter Notebook00
multiomics-ebpmf
Applying EBPMF to multiomics data
Language:Python00
GenometracksByGenotype
Helper script to plot molQTLs. Normalize and group bigwigs by genotype.
Language:Python21
CS281A_Project
Language:Python00
ChromatinSplicingQTLs
Language:Jupyter Notebook00

cfbuenabadn's Repositories

cfbuenabadn/gtex-stm
Application of STM/SGoM models to GTEx data
Language:Jupyter Notebook
cfbuenabadn/sc_splicing_tools
Language:Python11
cfbuenabadn/cfbuenabadn.github.io
Postdoctoral scholar at the University of Chicago
cfbuenabadn/multiomics-ebpmf
Applying EBPMF to multiomics data
Language:Python
cfbuenabadn/YosefCode2
Repeal and replace TopHat (with STAR) in the pipeline.
Language:Jupyter Notebook3