cfbuenabadn

Postdoc at UChicago. PhD in Computational Biology from UC Berkeley. Alternative splicing in single cells.

UChicago

Pinned Repositories

GenometracksByGenotype
Helper script to plot molQTLs. Normalize and group bigwigs by genotype.
Language:Python3 3 11
AggregateGenometracks
For from Ben Fair's GenometracksByGenotype. Helper script to plot genometracks. Normalize and group bigwigs by group.
Language:Python00
cfbuenabadn.github.io
Postdoctoral scholar at the University of Chicago
Language:HTML0 1 00
gtex-stm
Application of STM/SGoM models to GTEx data
Language:Jupyter Notebook2 1 00
leafcutter2
Language:Python00
multiomics-ebpmf
Applying EBPMF to multiomics data
Language:Python00
sc_splicing_tools
Language:Python1 1 11
YosefCode2
Repeal and replace TopHat (with STAR) in the pipeline.
Language:Jupyter Notebook30
psix
Language:Python14 2 97
sc_binary_splicing
Dataset analysis, simulations and figures from single cell splicing paper
Language:Jupyter Notebook4 3 01

cfbuenabadn's Repositories

cfbuenabadn/YosefCode2
Repeal and replace TopHat (with STAR) in the pipeline.
Language:Jupyter Notebook30
cfbuenabadn/gtex-stm
Application of STM/SGoM models to GTEx data
Language:Jupyter Notebook2 1 00
cfbuenabadn/sc_splicing_tools
Language:Python1 1 11
cfbuenabadn/AggregateGenometracks
For from Ben Fair's GenometracksByGenotype. Helper script to plot genometracks. Normalize and group bigwigs by group.
Language:Python00
cfbuenabadn/cfbuenabadn.github.io
Postdoctoral scholar at the University of Chicago
Language:HTML0 1 00
cfbuenabadn/leafcutter2
Language:Python00
cfbuenabadn/multiomics-ebpmf
Applying EBPMF to multiomics data
Language:Python00