chaitrasarathy
Programmer, Bioinformatician, Systems Biologist specialised in developing algorithms for omics integration and metabolic modelling
Toronto, Canada
Pinned Repositories
awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
chaitrasarathy.github.io
my personal website
COBRA.tutorials
Repository of tutorials for The COBRA Toolbox
cobratoolbox
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
ComMet
COMpare METabolic States using genome-scale metabolic models
efmviz
EFM Visualization
githubpages-docker-demo
This is a demo for creating GitHub pages using Docker
Machine-Learning-on-Breast-Cancer-Survival-Prediction
We used different machine learning approaches to build models for detecting and visualizing important prognostic indicators of breast cancer survival rate. This repository contains R source codes for 5 steps which are, model evaluation, Random Forest further modelling, variable importance, decision tree and survival analysis. These can be a pipelin
mooseCodes
tidytuesday_r4ds
Official repo for the #tidytuesday project
chaitrasarathy's Repositories
chaitrasarathy/ComMet
COMpare METabolic States using genome-scale metabolic models
chaitrasarathy/awesome-machine-learning
A curated list of awesome Machine Learning frameworks, libraries and software.
chaitrasarathy/chaitrasarathy.github.io
my personal website
chaitrasarathy/COBRA.tutorials
Repository of tutorials for The COBRA Toolbox
chaitrasarathy/cobratoolbox
The COnstraint-Based Reconstruction and Analysis Toolbox. Documentation:
chaitrasarathy/efmviz
EFM Visualization
chaitrasarathy/githubpages-docker-demo
This is a demo for creating GitHub pages using Docker
chaitrasarathy/Machine-Learning-on-Breast-Cancer-Survival-Prediction
We used different machine learning approaches to build models for detecting and visualizing important prognostic indicators of breast cancer survival rate. This repository contains R source codes for 5 steps which are, model evaluation, Random Forest further modelling, variable importance, decision tree and survival analysis. These can be a pipelin
chaitrasarathy/mooseCodes
chaitrasarathy/ontologies-workshop
Material for the Ontologies workshop (one episode in the Data Science Workshop Series)
chaitrasarathy/tidytuesday_r4ds
Official repo for the #tidytuesday project
chaitrasarathy/tidytuesdaycs
My attempt at the #TidyTuesday challenge, with the visualizations and code
chaitrasarathy/scoring_cancer_samples
chaitrasarathy/scRNAseq-with-seurat
Generic pipeline to analyse scRNAseq data using Seurat