charlesrocabert
Computational and Mathematical Biologist. Exploring the evolution of complex organisms - Research associate at HHU Düsseldorf
Faculty of Mathematics and Natural Science - HHU DüsseldorfDüsseldorf, Germany
Pinned Repositories
charlesrocabert
charlesrocabert.github.io
charlesrocabert.github.io.utterances.comments
Personal blog comments management.
Evo2Sim
Digital evolution model dedicated to bacterial in silico experimental evolution.
gbapy
Growth balance analysis in Python
Koch-et-al-Predictability-of-Gene-Expression
Tribolium castaneum transcriptomics pipeline developed for Koch et al. manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes".
MetEvolSim
MetEvolSim (Metabolome Evolution Simulator). A Python package to simulate the long-term evolution of metabolic levels.
MoRIS
MoRIS (Model of Routes of Invasive Spread). A simulator of human-mediated dispersal via transportation networks.
puutools
Easy-to-use C++ library for the live tracking of lineage and coalescence trees in individual-based forward-in-time simulations.
SigmaFGM
Individual-based implementation of Fisher's geometric model with evolvable phenotypic noise.
charlesrocabert's Repositories
charlesrocabert/Evo2Sim
Digital evolution model dedicated to bacterial in silico experimental evolution.
charlesrocabert/MetEvolSim
MetEvolSim (Metabolome Evolution Simulator). A Python package to simulate the long-term evolution of metabolic levels.
charlesrocabert/MoRIS
MoRIS (Model of Routes of Invasive Spread). A simulator of human-mediated dispersal via transportation networks.
charlesrocabert/gbapy
Growth balance analysis in Python
charlesrocabert/Koch-et-al-Predictability-of-Gene-Expression
Tribolium castaneum transcriptomics pipeline developed for Koch et al. manuscript "Gene expression evolution is predicted by stronger selection at more pleiotropic genes".
charlesrocabert/charlesrocabert
charlesrocabert/charlesrocabert.github.io
charlesrocabert/charlesrocabert.github.io.utterances.comments
Personal blog comments management.
charlesrocabert/puutools
Easy-to-use C++ library for the live tracking of lineage and coalescence trees in individual-based forward-in-time simulations.
charlesrocabert/SigmaFGM
Individual-based implementation of Fisher's geometric model with evolvable phenotypic noise.
charlesrocabert/Thesis
Thesis manuscript (defended Nov. 17th, 2017).
charlesrocabert/Tribolium-castaneum-transcriptomics-pipeline
Tribolium castaneum integrative-omics pipeline
charlesrocabert/Rocabert-et-al-2023-Ecography
Supporting information for Rocabert et al. (2023) Ecography publication "Accounting for the topology of road networks to better explain human-mediated dispersal in terrestrial landscapes"