Pinned Repositories
multi-package-containers
Testing building mulled containers for multi-requirement tools.
EMBL_Theory
Repo for EMBL predoc course theory week project on RNAseq and ML
EMBL_theory_rna
hush
Data availability and bioinformatics data analyses - Seczynska M. et al., 2021
I69_4_coverage
Analysis of the coverage of raw Nanopore reads aligned onto the I69-4 O.dioica genome
super_scaffolding
luslab-nf-modules
Luslab nextflow modules
nf-cut-tag
clipseq
CLIP sequencing analysis pipeline for QC, pre-mapping, genome mapping, UMI deduplication, and multiple peak-calling options.
cutandrun
Analysis pipeline for CUT&RUN and CUT&TAG experiments that includes QC, support for spike-ins, IgG controls, peak calling and downstream analysis.
charlotte-west's Repositories
charlotte-west/EMBL_Theory
Repo for EMBL predoc course theory week project on RNAseq and ML
charlotte-west/EMBL_theory_rna
charlotte-west/hush
Data availability and bioinformatics data analyses - Seczynska M. et al., 2021
charlotte-west/I69_4_coverage
Analysis of the coverage of raw Nanopore reads aligned onto the I69-4 O.dioica genome
charlotte-west/super_scaffolding