Pinned Repositories
alphafold
Open source code for AlphaFold.
crispri
Primer design tool for CRISPR interference in Mycobacteria
DEPhT
Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences
phamclust
Pham-based genome clustering
phamdb
Quickly create and modify Phamerator databases.
phammseqs
Assort phage protein sequences into phamilies using MMseqs2
phamnexus
Bridging the gap between Phamerator databases and Splitstree diagrams
py-mmseqs
A Python3 wrapper around MMseqs2
phamdb
Quickly create and modify Phamerator databases.
pdm_utils
MySQL phage genomics database management utilities
chg60's Repositories
chg60/DEPhT
Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences
chg60/phammseqs
Assort phage protein sequences into phamilies using MMseqs2
chg60/phamclust
Pham-based genome clustering
chg60/phamnexus
Bridging the gap between Phamerator databases and Splitstree diagrams
chg60/crispri
Primer design tool for CRISPR interference in Mycobacteria
chg60/phamdb
Quickly create and modify Phamerator databases.
chg60/py-mmseqs
A Python3 wrapper around MMseqs2