chg60

Postdoctoral researcher

University of Pittsburgh

Pinned Repositories

alphafold
Open source code for AlphaFold.
Language:Python00
crispri
Primer design tool for CRISPR interference in Mycobacteria
Language:Python00
DEPhT
Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences
Language:HTML16 2 103
phamclust
Pham-based genome clustering
Language:Python51
phamdb
Quickly create and modify Phamerator databases.
Language:JavaScript00
phammseqs
Assort phage protein sequences into phamilies using MMseqs2
Language:Python60
phamnexus
Bridging the gap between Phamerator databases and Splitstree diagrams
Language:Python10
py-mmseqs
A Python3 wrapper around MMseqs2
Language:Python00
phamdb
Quickly create and modify Phamerator databases.
Language:JavaScript55
pdm_utils
MySQL phage genomics database management utilities
Language:Python3 6 175

chg60's Repositories

chg60/DEPhT
Fast and sensitive discovery of complete phages and prophages in bacterial genome sequences
Language:HTML16 2 103
chg60/phammseqs
Assort phage protein sequences into phamilies using MMseqs2
Language:Python60
chg60/phamclust
Pham-based genome clustering
Language:Python51
chg60/phamnexus
Bridging the gap between Phamerator databases and Splitstree diagrams
Language:Python10
chg60/crispri
Primer design tool for CRISPR interference in Mycobacteria
Language:Python00
chg60/phamdb
Quickly create and modify Phamerator databases.
Language:JavaScript00
chg60/py-mmseqs
A Python3 wrapper around MMseqs2
Language:Python00