chlazaris
I am a Senior Expert I in Oncology Data Science at Novartis BioMedical Research
Novartis BioMedical ResearchCambridge, MA
chlazaris's Stars
bkamins/JuliaForDataAnalysis
Codes for the book "Julia for Data Analysis"
Dowell-Lab/DAStk
Differential ATAC-seq toolkit
ziishaned/learn-regex
Learn regex the easy way
marp-team/marp-cli
A CLI interface for Marp and Marpit based converters
4dn-dcic/chip-seq-pipeline2
4DN chip-seq pipeline, inherited from ENCODE chip-seq pipeline
storopoli/Julia-Workshop
JuliaCon 2022 - Introduction to Julia Tutorial
crazyhottommy/getting-started-with-genomics-tools-and-resources
Unix, R and python tools for genomics and data science
marp-team/marp
The entrance repository of Markdown presentation ecosystem
fluentpython/example-code-2e
Example code for Fluent Python, 2nd edition (O'Reilly 2022)
juliaolivieri/cme257-advanced-julia
Advanced Topics in Scientific Computing with Julia
mdozmorov/HiC_tools
A collection of tools for Hi-C data analysis
ttscoff/mmd2cheatset
timholy/AdvancedScientificComputing
A short course on Julia and open-source software development
Textualize/rich-cli
Rich-cli is a command line toolbox for fancy output in the terminal
stevekm/bash_commands
Short bash scripts that I've written and / or found useful. Also check my gists; https://gist.github.com/stevekm
stevekm/fastq-checker
quick workflow to validate fastq file integrity
stevekm/nextflow-boilerplate
Boilerplate code for Nextflow pipelines
fjossinet/RNArtist
With RNArtist, you construct a collection of RNA structures that can be gathered into RNA families, projects,...
stjude/BAM2GFF
BAMtoGFF, matrix density, plot visualizations
yousra291987/ChiCMaxima
shenwei356/seqkit
A cross-platform and ultrafast toolkit for FASTA/Q file manipulation
eblancoga/seqcode
Suite of command-line software for high-performance graphical analysis of ChIP-seq/RNA-seq/ATAC-seq data
crazyhottommy/bioinformatics-one-liners
Bioinformatics one liners from Ming Tang
MiMiroot/PIC
Pausing Index Calculator
qmk/qmk_firmware
Open-source keyboard firmware for Atmel AVR and Arm USB families
bioinfo-pf-curie/ATAC-seq
Nextflow pipeline for ATAC-seq data analysis
Xpra-org/xpra
Persistent remote applications for X11; screen sharing for X11, MacOS and MSWindows.
visenger/awesome-mlops
A curated list of references for MLOps
peterk87/sublime-nextflow
Nextflow workflow syntax highlighting and snippets for Sublime Text 4
skilldocs/git4
Docs for Git in 4 weeks course