chlazaris
I am a Senior Expert I in Oncology Data Science at Novartis BioMedical Research
Novartis BioMedical ResearchCambridge, MA
chlazaris's Stars
practical-tutorials/project-based-learning
Curated list of project-based tutorials
jlevy/the-art-of-command-line
Master the command line, in one page
trimstray/the-book-of-secret-knowledge
A collection of inspiring lists, manuals, cheatsheets, blogs, hacks, one-liners, cli/web tools and more.
ziishaned/learn-regex
Learn regex the easy way
matheusfelipeog/beautiful-docs
Pointers to useful, well-written, and otherwise beautiful documentation.
hadley/r4ds
R for data science: a book
nextflow-io/nextflow
A DSL for data-driven computational pipelines
randy3k/radian
A 21 century R console
mcanouil/awesome-quarto
A curated list of Quarto talks, tools, examples & articles! Contributions welcome!
hbctraining/DGE_workshop
nextflow-io/patterns
A curated collection of Nextflow implementation patterns
bkamins/JuliaForDataAnalysis
Codes for the book "Julia for Data Analysis"
TidierOrg/TidierPlots.jl
Tidier data visualization in Julia, modeled after the ggplot2 R package.
junjunlab/GseaVis
An implement R package to visualize GSEA results
stevekm/nextflow-demos
Example Nextflow pipelines and programming techniques
grst/containerize-conda
Turn an existing conda environment into a Singularity container
njtierney/qmd4sci
quarto for scientists
Dowell-Lab/DAStk
Differential ATAC-seq toolkit
phageghost/python-genome-browser
Tools for making plots of genomic datasets in a genome-browser-like format
crazyhottommy/compbio_resources_chatomics
seqeralabs/wave-showcase
Examples showing how to configure Nextflow to run with Wave containers provisioning service
shahab-sarmashghi/ISTAT
Computing statistics for overlapping sets of intervals
bioinfo-pf-curie/ChIP-seq
Nextflow pipeline for ChIP-seq data quality controls and analysis
stevekm/nf-dashboard
Web dashboard to track Nextflow workflow progress
telatin/singularities
Scripts and notes for singularity containers used for bioinformatics analyses
stevekm/grep
GNU grep implemented in Rust
stevekm/nf-core-modules
Repository to host tool-specific module files for the Nextflow DSL2 community!
stevekm/UCSC-custom-track-generator
Script to automatically generate custom tracks to load on UCSC
stevekm/hic-bench_documentation
User manuals for the HiC-Bench software
stevekm/nf-bio-basic
Nextflow basic Bioinformatics workflow for testing and demonstration