chrchang/eigensoft

no snps found: snpfname

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wangwl commented

Hi, I keep getting this error message when run smartpca.

Here is my command: smartpca -p samples.pca.par

And I have a snp file generated according to https://github.com/chrchang/eigensoft/blob/master/CONVERTF/README

Could you please help with this?

Thanks,
Wenliang