Pinned Repositories
CAN-Disorder-Protein-Retriever
CAN (core and noncore) Disorder Protein retriever uses Homologene to find homologous proteins for human, fly, worm, yeast, and frog, and then queries those proteins in D2P2 database for disorder.
PaintSHOP_pipeline
A scalable machine learning pipeline for probe specificity prediction.
STARR_Seq_to_MPRAnalyze_input
Starr Seq to MPRAnalyze input is an easy way to convert zipped fastq to csv files as an input for MPRAnalyze. I adopted and repurposed most of the processing scripts from Arpit Mishra (post-doc in the Hawkins lab).
chrhsu's Repositories
chrhsu/CAN-Disorder-Protein-Retriever
CAN (core and noncore) Disorder Protein retriever uses Homologene to find homologous proteins for human, fly, worm, yeast, and frog, and then queries those proteins in D2P2 database for disorder.
chrhsu/PaintSHOP_pipeline
A scalable machine learning pipeline for probe specificity prediction.