Install fails -- extra space in manual files

[dpcook]

Hey Chris,

Just tried re-installing the package. Installation fails. If I'm interpreting the error correctly, it seems to not like the space in the arguments section of the manual files:

* installing *source* package ‘deMULTIplex’ ...
** using staged installation
** R
** byte-compile and prepare package for lazy loading
** help
Error : (converted from warning) bad markup (extra space?) at MULTIseq.preProcess.Rd:12:12
ERROR: installing Rd objects failed for package ‘deMULTIplex’
* removing ‘/Library/Frameworks/R.framework/Versions/3.6/Resources/library/deMULTIplex’
Error in i.p(...) : 
  (converted from warning) installation of package ‘/var/folders/y9/j0gdhnsd1mn1lj2gsfqr532h0000gp/T//Rtmploqg3m/fileab5fe3b277d/deMULTIplex_1.0.2.tar.gz’ had non-zero exit status

> sessionInfo()
R version 3.6.0 (2019-04-26)
Platform: x86_64-apple-darwin15.6.0 (64-bit)
Running under: macOS Mojave 10.14.4

Matrix products: default
BLAS:   /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib
LAPACK: /Library/Frameworks/R.framework/Versions/3.6/Resources/lib/libRlapack.dylib

locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] Rcpp_1.0.1         rstudioapi_0.10    knitr_1.22         magrittr_1.5       usethis_1.5.0      devtools_2.0.2    
 [7] pkgload_1.0.2      R6_2.4.0           rlang_0.3.4        tools_3.6.0        pkgbuild_1.0.3     xfun_0.6          
[13] sessioninfo_1.1.1  cli_1.1.0          withr_2.1.2        remotes_2.0.4      assertthat_0.2.1   digest_0.6.18     
[19] rprojroot_1.3-2    crayon_1.3.4       processx_3.3.0     BiocManager_1.30.4 callr_3.2.0        fs_1.3.1          
[25] ps_1.3.0           curl_3.3           glue_1.3.1         memoise_1.1.0      compiler_3.6.0     desc_1.2.0        
[31] backports_1.1.4    prettyunits_1.0.2 

[chris-mcginnis-ucsf]

Hey David,

I just edited out those extra spaces, and reinstalled without any of those warnings. With that being said, I also didn't get an error during my first reinstallation attempt (i.e., before making any edits) despite getting the 'extra-space' warnings, so I'm worried that there may be something else at play...

Let me know if this works,
Chris

[dpcook]

Just tested and installed without any errors! Thanks Chris