christear

Pinned Repositories

APAIQ_release
released version of APAIQ
Language:Python5 1 111
DeeReCT-TSS_release
This repository contains the implementation of DeeReCT-TSS
Language:Python0 0 00
DSC
R package source code
Language:R0 1 00
DSCSeq
R pakage source code
Language:R0 1 00
EMu
An Expectation-Maximization algorithm to infer mutational signatures
Language:C++0 1 00
G4splicing
code for reproducing figures in the RNA G4 splicing study
Language:R0 1 00
htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
Language:Java0 1 00
IPA-neoantigen-prediction
In silico method to predict the IPA-derived neoantigens based on large-scale RNA-seq datasets.
Language:Perl1 0 00
REST
REST: a RNA 3'End Sequencing data analysis Toolkit
Language:Python10
RNASeq3USP
transcriptome-wide profiling 3'UTR splicing events using conventional RNA sequencing data
Language:Shell6 2 21

christear's Repositories

christear/RNASeq3USP
transcriptome-wide profiling 3'UTR splicing events using conventional RNA sequencing data
Language:Shell6 2 21
christear/APAIQ_release
released version of APAIQ
Language:Python5 1 111
christear/IPA-neoantigen-prediction
In silico method to predict the IPA-derived neoantigens based on large-scale RNA-seq datasets.
Language:Perl1 0 00
christear/REST
REST: a RNA 3'End Sequencing data analysis Toolkit
Language:Python10
christear/DeeReCT-TSS_release
This repository contains the implementation of DeeReCT-TSS
Language:Python0 0 00
christear/DSC
R package source code
Language:R0 1 00
christear/DSCSeq
R pakage source code
Language:R0 1 00
christear/EMu
An Expectation-Maximization algorithm to infer mutational signatures
Language:C++0 1 00
christear/G4splicing
code for reproducing figures in the RNA G4 splicing study
Language:R0 1 00
christear/htsjdk
A Java API for high-throughput sequencing data (HTS) formats.
Language:Java0 1 00
christear/PASTA
Language:R0 0 00
christear/rnaseqlib
RNA-Seq pipeline
Language:Python0 1 00
christear/seurat
R toolkit for single cell genomics
Language:R