Pinned Repositories
abyss
:microscope: Assemble large genomes using short reads
alphafold
Open source code for AlphaFold.
AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
alphafold3-pytorch
Implementation of Alphafold 3 in Pytorch
AlphaFold3a
Open source implementation of AlphaFold3
big
How-to-Make-a-Computer-Operating-System
How to Make a Computer Operating System in C++
siga
SIGA is a de novo genome assembler compatible with the SGA file format
website
My home page
xfcrawl
chungongyu's Repositories
chungongyu/siga
SIGA is a de novo genome assembler compatible with the SGA file format
chungongyu/How-to-Make-a-Computer-Operating-System
How to Make a Computer Operating System in C++
chungongyu/website
My home page
chungongyu/xfcrawl
chungongyu/abyss
:microscope: Assemble large genomes using short reads
chungongyu/alphafold
Open source code for AlphaFold.
chungongyu/AlphaFold3
Implementation of Alpha Fold 3 from the paper: "Accurate structure prediction of biomolecular interactions with AlphaFold3" in PyTorch
chungongyu/alphafold3-pytorch
Implementation of Alphafold 3 in Pytorch
chungongyu/big
chungongyu/brew
:beer::penguin: The Homebrew package manager for Linux
chungongyu/chroma
A generative model for programmable protein design
chungongyu/esm
chungongyu/foldseek
Foldseek enables fast and sensitive comparisons of large structure sets.
chungongyu/graphviz
Simple Python interface for Graphviz
chungongyu/jupyter_tensorboard
Start Tensorboard in Jupyter Notebook
chungongyu/chai-lab
Chai-1, SOTA model for biomolecular structure prediction
chungongyu/Frame2seq
Structure-conditioned masked language modeling for protein sequence design
chungongyu/langchain
🦜🔗 Build context-aware reasoning applications
chungongyu/LRTK-SIM
A program to simulate linked reads sequencing from 10X Chromium System
chungongyu/minimal-mistakes
:triangular_ruler: Jekyll theme for building a personal site, blog, project documentation, or portfolio.
chungongyu/progen2
chungongyu/ps-lite
A lightweight parameter server interface
chungongyu/solr
Apache Solr open-source search software