Pinned Repositories
chvandorp.github.io
cmv-genetics
flu-sampler
A Gibbs sampler for estimating epidemiological parameters from influenza-like illness time series
hboms
Python package for automatically generating Stan source code for hierarchical Bayesian ordinary differential equation models.
MHCshrubs
Find associations between HLA alleles and (disease) traits, making use of HLA relatedness trees
mlev-hiv-model
A multi-level model of HIV-1 evolutionary immuno-epidemiology
multiple-reactivation-model
Stan and Python scripts for a SIV/HIV viral rebound model with multiple reactivation events
ode_examples
ODE examples for the Southern-Summer School on Mathematical Biolog
scdynsys
Methods for fitting dynamical models to single-cell data
stan-immbio
Introduction to Stan for mathematical immunobiology
chvandorp's Repositories
chvandorp/stan-immbio
Introduction to Stan for mathematical immunobiology
chvandorp/MHCshrubs
Find associations between HLA alleles and (disease) traits, making use of HLA relatedness trees
chvandorp/chvandorp.github.io
chvandorp/cmv-genetics
chvandorp/flu-sampler
A Gibbs sampler for estimating epidemiological parameters from influenza-like illness time series
chvandorp/hboms
Python package for automatically generating Stan source code for hierarchical Bayesian ordinary differential equation models.
chvandorp/mlev-hiv-model
A multi-level model of HIV-1 evolutionary immuno-epidemiology
chvandorp/multiple-reactivation-model
Stan and Python scripts for a SIV/HIV viral rebound model with multiple reactivation events
chvandorp/ode_examples
ODE examples for the Southern-Summer School on Mathematical Biolog
chvandorp/scdynsys
Methods for fitting dynamical models to single-cell data
chvandorp/sellke-hiv-model
Immuno-epidemiological HIV model based on the Sellke construction