cindy12-gao

Pinned Repositories

napari_lattice
Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.
Language:Jupyter Notebook12 3 564
brainreg
Automated 3D brain registration with support for multiple species and atlases.
Language:Python00
slicereg
A 2D-3D histological brain slice registration application for mouse brains.
Language:Python00
napari-sim-lattice
Reconstruction of structured illumination microscopy (SIM) images using 2D grid patterns and the classical algorithm from Mats Gustaffson et al.
Language:Python4 1 10
ABBA-QuPath-RegistrationAnalysis
A visualization app for 3D-registered data processed in ABBA and QuPath
Language:Python13 5 93

cindy12-gao's Repositories

cindy12-gao/brainreg
Automated 3D brain registration with support for multiple species and atlases.
Language:Python00
cindy12-gao/slicereg
A 2D-3D histological brain slice registration application for mouse brains.
Language:Python00