Pinned Repositories
AIDE-api
API for the AIDE application
AIDE-front-end
The front end of the AIDE application
hnn-core
Simulation and optimization of neural circuits for MEG/EEG source estimates
kingjr_natmeg_arhus
copy of JR King's Matlab code
mne-python
MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python
nrntraub
Traub 2005 model for coreneuron
VSC-MEG-analysis
MINDLAB2013_01-MEG-AttentionEmotionVisualTracking
meeg-python
Python utilities and helper functions for meeg-cfin
stormdb-python
Python classes for interacting with the STORM database at CFIN
cjayb's Repositories
cjayb/AIDE-api
API for the AIDE application
cjayb/AIDE-front-end
The front end of the AIDE application
cjayb/hnn-core
Simulation and optimization of neural circuits for MEG/EEG source estimates
cjayb/AltaCV
Yet another alternative curriculum vitae/résumé class with LaTeX
cjayb/beta_burst_layers
Analysis code for Bonaiuto, et al "Laminar dynamics of beta bursts in human motor cortex"
cjayb/Broadsea
Broadsea deploys the core OHDSI technology stack (Atlas & R Hades), using cross-platform Docker container technology.
cjayb/bycycle
Cycle-by-cycle analysis of neural oscillations.
cjayb/coffeine
Covariance Data Frames for Predictive M/EEG Pipelines
cjayb/dotfiles
cjayb/EEG
Repo for EEG paper
cjayb/eyeloop
EyeLoop is a Python 3-based eye-tracker tailored specifically to dynamic, closed-loop experiments on consumer-grade hardware.
cjayb/fooof
Parameterizing neural power spectra into periodic & aperiodic components.
cjayb/Fruekilde_OCT_stall_quant_paper
Fruekilde et al. (in prepration)
cjayb/handson-ml2
A series of Jupyter notebooks that walk you through the fundamentals of Machine Learning and Deep Learning in Python using Scikit-Learn, Keras and TensorFlow 2.
cjayb/haystack
:mag: AI orchestration framework to build customizable, production-ready LLM applications. Connect components (models, vector DBs, file converters) to pipelines or agents that can interact with your data. With advanced retrieval methods, it's best suited for building RAG, question answering, semantic search or conversational agent chatbots.
cjayb/haystack-experimental
🧪 Experimental features for Haystack
cjayb/hnn
The Human Neocortical Neurosolver (HNN) is a software tool that gives researchers/clinicians the ability to develop/test hypotheses on circuit mechanisms underlying EEG/MEG data.
cjayb/hnn-core-examples
cjayb/iCSD
Python-implementation of the inverse current source density (iCSD) methods from http://software.incf.org/software/csdplotter
cjayb/LFPy
Python-module for calculation of extracellular potentials from multicompartment neuron models and networks
cjayb/MLEP-public
Public repo for DeepLearning.AI MLEP Specialization
cjayb/modern-unix
A collection of modern/faster/saner alternatives to common unix commands.
cjayb/neurodsp
Digital signal processing for neural time series.
cjayb/neuronaldynamics-exercises
Python exercises accompanying the book "Neuronal Dynamics"
cjayb/neuropythy
A neuroscience library for Python, intended to complement the existing nibabel library.
cjayb/OMOP-5.4-PostgreSQL
OMOP CDM 5.4 PostgreSQL Docker Image
cjayb/sbi
Simulation-based inference in PyTorch
cjayb/streamlit-fastapi-model-serving
Simple web app example serving a PyTorch model using streamlit and FastAPI
cjayb/uncertainpy
Uncertainpy: a Python toolbox for uncertainty quantification and sensitivity analysis, tailored towards computational neuroscience.
cjayb/xvfbwrapper
Manage headless displays with Xvfb (X virtual framebuffer)