Pinned Repositories
2022_Fiscus_Dissertation
Code repo for dissertation
academic-kickstart
📝 Easily create a beautiful website using Academic, Hugo, and Netlify
analysis_examples
Short examples of various types of analysis, mostly for my own reference
capsella_genomes
chipseq_mc
ChIP-seq analysis for M. Chen Lab.
cjfiscus.github.io
config-files
My config files
CV
curriculum vitae
klwiki
vitis_svs
scripts for calling SVs in Vitis short-read data
cjfiscus's Repositories
cjfiscus/klwiki
cjfiscus/2022_Fiscus_Dissertation
Code repo for dissertation
cjfiscus/vitis_svs
scripts for calling SVs in Vitis short-read data
cjfiscus/academic-kickstart
📝 Easily create a beautiful website using Academic, Hugo, and Netlify
cjfiscus/analysis_examples
Short examples of various types of analysis, mostly for my own reference
cjfiscus/capsella_genomes
cjfiscus/chipseq_mc
ChIP-seq analysis for M. Chen Lab.
cjfiscus/cjfiscus.github.io
cjfiscus/config-files
My config files
cjfiscus/cowpea_gwas
Variant filtering and GWAS pipeline for analyses in cowpea
cjfiscus/CV
curriculum vitae
cjfiscus/extract-genomic-features
Quick and dirty pipeline to extra genomic features from Arabidopsis thaliana genome. Easily adaptable to other genomes given genome assembly and .gff annotation.
cjfiscus/INDELible
Team project for GEN 220 Fall 2017
cjfiscus/Kmer-it
cjfiscus/Kmer-it_old
cjfiscus/old
Old scripts from previous projects
cjfiscus/practical-python
Practical Python Programming (course by @dabeaz)
cjfiscus/pt_anno
high-throughput pt annotation
cjfiscus/R_plots
R plotting examples
cjfiscus/RNA-seq-assembly-tutorial
Rough tutorial for de novo assembly of RNA-seq reads using common bioinformatic tools.
cjfiscus/scripts
cjfiscus/Short_R_Tutorial
cjfiscus/starter-hugo-academic
cjfiscus/vitis_snps
scripts for vitis snp calling
cjfiscus/wubba-lubba-dub-dub
I am in great pain, please help me aka Rick and Morty quotes in the shell