Error in installation

[saleonard]

I get the following errors that prevent installing varimpact. I tried installing it using

install_github("ck37/varimpact") 

Error messages

trying URL 'https://bioconductor.org/packages/3.6/bioc/bin/windows/contrib/3.4/hopach_2.38.0.zip'
Error in download.file(url, destfile, method, mode = "wb", ...) : 
  cannot open URL 'https://bioconductor.org/packages/3.6/bioc/bin/windows/contrib/3.4/hopach_2.38.0.zip'
In addition: Warning message:
In download.file(url, destfile, method, mode = "wb", ...) :
  InternetOpenUrl failed: 'The operation timed out'
Warning in download.packages(pkgs, destdir = tmpd, available = available,  :
  download of package ‘hopach’ failed

ERROR: dependency 'hopach' is not available for package 'varimpact'
* removing 'C:/Users/sleo/Documents/R/win-library/3.4/varimpact'
In R CMD INSTALL
Installation failed: Command failed (1)

[ck37]

Looks like bioconductor is having issues due to their AWS hosting (e.g. try loading https://bioconductor.org/packages/3.6/bioc/bin/windows/contrib/3.4/hopach_2.38.0.zip directly to see the error message). So I would try again later tonight or tomorrow and they should resolve that.

…

On Thu, May 31, 2018 at 3:09 PM, Stephanie Leonard ***@***.*** > wrote: I get the following errors that prevent installing varimpact. I tried installing it using install_github("ck37/varimpact") *Error messages* trying URL 'https://bioconductor.org/packages/3.6/bioc/bin/windows/contrib/3.4/hopach_2.38.0.zip' Error in download.file(url, destfile, method, mode = "wb", ...) : cannot open URL 'https://bioconductor.org/packages/3.6/bioc/bin/windows/contrib/3.4/hopach_2.38.0.zip' In addition: Warning message: In download.file(url, destfile, method, mode = "wb", ...) : InternetOpenUrl failed: 'The operation timed out' Warning in download.packages(pkgs, destdir = tmpd, available = available, : download of package ‘hopach’ failed ERROR: dependency 'hopach' is not available for package 'varimpact' * removing 'C:/Users/sleo/Documents/R/win-library/3.4/varimpact' In R CMD INSTALL Installation failed: Command failed (1) — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#9>, or mute the thread <https://github.com/notifications/unsubscribe-auth/AADGUuF4p35omsbjg6Qa6z52oMiklqYqks5t4GoAgaJpZM4UV0BG> .

[saleonard]

Thanks, that worked.

[ck37]

Cool cool, glad to hear it