Pinned Repositories
cmm262-2020
Quantitative Methods in Genetics and Genomics Course 2020
bento-kitchen
Sandbox for bento analysis and spatial datasets
bento-manuscript
Analyses to reproduce figures in the Bento manuscript.
bento-tools
A Python toolkit for subcellular analysis of spatial transcriptomics data
BISB-Bootcamp-2021
FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program
ckmah.github.io
Clarence Mah's personal website.
DangoReader
A clean & modern app for reading manga.
dotfiles
My dotfiles.
PhD-Dissertation
Files used to generate Clarence Mah's Ph.D. Dissertation
project-template
Template for Jupyter Notebook projects.
ckmah's Repositories
ckmah/bento-tools
A Python toolkit for subcellular analysis of spatial transcriptomics data
ckmah/project-template
Template for Jupyter Notebook projects.
ckmah/bento-kitchen
Sandbox for bento analysis and spatial datasets
ckmah/PhD-Dissertation
Files used to generate Clarence Mah's Ph.D. Dissertation
ckmah/bento-manuscript
Analyses to reproduce figures in the Bento manuscript.
ckmah/BISB-Bootcamp-2021
FA2021 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program
ckmah/ckmah.github.io
Clarence Mah's personal website.
ckmah/jupyterlab_notion_theme
ckmah/dotfiles
My dotfiles.
ckmah/ashlar
ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration
ckmah/BISB-Bootcamp-2020
FA2020 Bootcamp course website for the incoming cohort of the Bioinformatics & Systems Biology Ph.D. program
ckmah/carter-lab-site
ckmah/cell2cell
User-friendly tool to infer cell-cell interactions and communication from gene expression of interacting proteins
ckmah/cmm262-notebook
ckmah/corne-lp-zmk-config
ckmah/interpretable-ml-book
Book about interpretable machine learning
ckmah/mplcyberpunk
"Cyberpunk style" for matplotlib plots
ckmah/nf-core-ismb
ckmah/nf-core-rnaflow
ckmah/pandas
Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more
ckmah/rbp-binding-profiler
ckmah/readthedocs.org
The source code that powers readthedocs.org
ckmah/scanpy
Single-Cell Analysis in Python. Scales to >1M cells.
ckmah/scvi-tools
Deep probabilistic analysis of single-cell omics data
ckmah/spatialdata
An open and interoperable data framework for spatial omics data
ckmah/spatialdata-plot
Static plotting for spatialdata
ckmah/Sphinx-Autosummary-Recursion
Demonstrating the new automatic package recursion facility in sphinx.ext.autosummary version 3.1
ckmah/starter-hugo-online-course
👩🏼🏫 Create an online course or coaching business with Wowchemy Website Builder for Hugo. 创建在线课程
ckmah/webcam_barcode_scanner
A simple barcode scanner web-app
ckmah/zmk-config