Use aspera to download data from EBI or NCBI at high speed
[@login ~]$ python3 main.py --h
usage: download.py [-h] [--project PROJECT] [--sra SRA] [--key KEY] [--ncbi]
[--save] [--exclude EXCLUDE] [--include INCLUDE]
optional arguments:
-h, --help show this help message and exit
--project PROJECT project name, such as PRJNA320473
--sra SRA list file of sra name
--key KEY private-key file name (id_rsa) of aspera
--ncbi download form NCBI database, default EBI
--save whether save url file, default ./ftp_url.json[useful for
--project]
--exclude EXCLUDE The downloaded file excludes the following accession, and
provide the accession list file
--include INCLUDE The downloaded file includes the following accession, and
provide the accession list file