Pinned Repositories
AAMR_DEL
Codes for AAMR project
cluhaowie
My personal repository
GREGoR_RareVariantAnalyzer
Shiny app for parsing the vcf
HMZDelFinder
CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data
HMZDupFinder
PhaseDenovo
SECNVs
A tool for simulating CNVs for WES data. It simulates rearranged genome(s), short reads (fastq) and BAM file(s) automatically in one single command.
VizCNV
VizCNV is an interactive tool designed to analyze and visualize CNVs from short read WGS data in rare disease research. Built on R Studio Shiny, it streamlines the identification of complex genomic rearrangements and facilitates advancements in understanding and diagnosing rare genetic conditions.
DeNovoSV
A pipeline for calling de novo structural variants from a trio with Nanopore long read data
cluhaowie's Repositories
cluhaowie/VizCNV
VizCNV is an interactive tool designed to analyze and visualize CNVs from short read WGS data in rare disease research. Built on R Studio Shiny, it streamlines the identification of complex genomic rearrangements and facilitates advancements in understanding and diagnosing rare genetic conditions.
cluhaowie/AAMR_DEL
Codes for AAMR project
cluhaowie/cluhaowie
My personal repository
cluhaowie/GREGoR_RareVariantAnalyzer
Shiny app for parsing the vcf
cluhaowie/HMZDelFinder
CNV calling algorithm for detection of homozygous and hemizygous deletions from whole exome sequencing data
cluhaowie/HMZDupFinder
cluhaowie/PhaseDenovo
cluhaowie/SECNVs
A tool for simulating CNVs for WES data. It simulates rearranged genome(s), short reads (fastq) and BAM file(s) automatically in one single command.