Pinned Repositories
canaline
Match boxes to text.
cannyfs
A shim file system giving excellent throughput by assuming all I/O operations CAN complete successfully.
cnF2freq
Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.
containers
Containers for use on Singularity Hub
cxic9714-analysis
demorepo
Demo for workshop.
GenoCAE
Convolutional autoencoder for genotype data
grafana
Gorgeous metric viz, dashboards & editors for Graphite, InfluxDB & OpenTSDB
imputato
Efficient imputation of auto-polyploids and other scenarios.
jackdaw
Tools for handling phase retrieval and related tasks in sparse (low-signal) X-ray single particle imaging applications, specifically COACS.
cnettel's Repositories
cnettel/cannyfs
A shim file system giving excellent throughput by assuming all I/O operations CAN complete successfully.
cnettel/cnF2freq
Compute haplotype and genotype probabilities, and perform imputation, in arbitrary pedigrees, including cases under possible observational errors.
cnettel/jackdaw
Tools for handling phase retrieval and related tasks in sparse (low-signal) X-ray single particle imaging applications, specifically COACS.
cnettel/canaline
Match boxes to text.
cnettel/containers
Containers for use on Singularity Hub
cnettel/cxic9714-analysis
cnettel/demorepo
Demo for workshop.
cnettel/GenoCAE
Convolutional autoencoder for genotype data
cnettel/grafana
Gorgeous metric viz, dashboards & editors for Graphite, InfluxDB & OpenTSDB
cnettel/h5py
HDF5 for Python -- The h5py package is a Pythonic interface to the HDF5 binary data format.
cnettel/imputato
Efficient imputation of auto-polyploids and other scenarios.
cnettel/htslib
C library for high-throughput sequencing data formats
cnettel/hummingbird
Monitoring and Analysing flash X-ray imaging experiments
cnettel/libfuse
The reference implementation of the Linux FUSE (Filesystem in Userspace) interface
cnettel/saml
SAML library for go
cnettel/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
cnettel/shapeit4
Segmented HAPlotype Estimation and Imputation Tool
cnettel/Shocksolution_Examples
Example code from shocksolution.com
cnettel/slurm
Slurm: A Highly Scalable Workload Manager
cnettel/snmp-fetch
An opinionated python3.7 SNMPv2 package designed for rapid database ingestion.
cnettel/uuadvstatcomp
Course Materials for R course
cnettel/workshop-neural-nets-and-deep-learning
NBIS workshop in Neural Nets and Deep Learning