Pinned Repositories
cmake-workshop
CMake
documentation
How to document your research software
ffmpeg-editlist
Script ffmpeg video cutting
git-intro
Introduction to version control with Git - Why we want to track versions and how to go back in time to a working version
jupyter-retired
Course material on Jupyter Notebooks.
mma
Mixed Martial Arts: Interfacing Fortran, C, C++, and Python for Great Good!
old-archived-lessons
Material for our lessons (legacy versions).
reproducible-research
Reproducible research - Preparing code to be usable by you and others in the future
sphinx-lesson
Sphinx extension for creating CodeRefinery lessons
testing
Automated testing - Preventing yourself and others from breaking your functioning code
coderefinery's Repositories
coderefinery/git-intro
Introduction to version control with Git - Why we want to track versions and how to go back in time to a working version
coderefinery/documentation
How to document your research software
coderefinery/reproducible-research
Reproducible research - Preparing code to be usable by you and others in the future
coderefinery/ffmpeg-editlist
Script ffmpeg video cutting
coderefinery/testing
Automated testing - Preventing yourself and others from breaking your functioning code
coderefinery/coderefinery.org
Coderefinery project website.
coderefinery/git-collaborative
Collaborative distributed version control lesson.
coderefinery/jupyter
Jupyter notebooks - A tool to write and share executable notebooks and data visualization
coderefinery/manuals
Diverse operation manuals for CodeRefinery workshops and lesson design.
coderefinery/social-coding
Social coding and open software - What can you do to get credit for your code and to allow reuse
coderefinery/template-workshop-webpage
You can create workshop pages from this template.
coderefinery/workshop-intro
Introduction and practical information for workshops.
coderefinery/sphinx-lesson-template
Empty template lesson
coderefinery/train-the-trainer
Our train-the-trainer course.
coderefinery/modular-type-along
Modular code development - Making reusing parts of your code easier
coderefinery/video-processing
Processed videos from CodeRefinery (and the workspace while creating them)
coderefinery/installation
CodeRefinery workshop software installation instructions.
coderefinery/presentations
Presentation slides.
coderefinery/research-software-engineering
"CodeRefinery in 1 hour" - What are good tools and practices in research software engineering?
coderefinery/calendar
CodeRefinery calendar (via github pages)
coderefinery/git-calendar
coderefinery/obs-cr
coderefinery/2025-09-09-workshop
CodeRefinery workshop September/October 2025
coderefinery/BioNT_Lesson_Accelerated_Genomics
Lesson materials for Accelerated Genomics introduction
coderefinery/coderefinery-artwork
CodeRefinery artwork and logos.
coderefinery/feedback
Collection of "sticky-note feedback" we have received over the years.
coderefinery/modular-type-along-exercise
This repo is for modular code development exercises in coderefinery workshop.
coderefinery/NumPy-and-Pandas-fundamentals-for-handling-biological-datasets
First Module of BioNT Applied Machine Learning for Biological data course
coderefinery/posters
Our posters.
coderefinery/sphinx-localtime