/SpeckledNeuronsAnalysis

Analisys code for "Readout of fluorescence functional signals through highly scattering tissue"

Primary LanguageJupyter NotebookGNU General Public License v3.0GPL-3.0

SpeckledNeuronsAnalysis


core scripts/libraries:

  • speckle_stuffs.py - various utilities related to speckles
  • speckle_neurons_demixing.py - apply NMF to prepared datasets
  • demixing_something.py - use the above function to analize datasets
  • moro_utils.py - few simple misc utilities

jupyter notebooks associated with the different figures:

  • supp_figs_##.ipynb