Pinned Repositories
AlignChips.vim
Fork of Dr Chip's Align.vim plugin (vimscript #294)
ATAC_Seq_nxf
ATAC_Seq Analysis Pipeline using Nextflow framework.
bufkill.vim
Git mirror of 'bufkilll.vim'. http://www.vim.org/scripts/script.php?script_id=1147
CommentFrame.vim
Add Comments in Frames to the file you're editing, or Comments aligned on the Right side of a line. Customizable!
ferm.vim
Vim syntax highlighting for filetype "ferm".
find_differential_primers
Scripts to aid the design of differential primers for diagnostic PCR.
jaxid_generator
Microbiome-Core JAXid tracking ID code generator and view/search web app
MA-GenTA
Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.
vimfiles
All options, plugins, keymaps, submodules for the mightiest editor in the world.
vim-ctrlspace
Vim Space Controller
cometsong's Repositories
cometsong/bufkill.vim
Git mirror of 'bufkilll.vim'. http://www.vim.org/scripts/script.php?script_id=1147
cometsong/find_differential_primers
Scripts to aid the design of differential primers for diagnostic PCR.
cometsong/AlignChips.vim
Fork of Dr Chip's Align.vim plugin (vimscript #294)
cometsong/cutlass
An iHMP domain specific API using osdf-python
cometsong/IndexedSearch.vim
shows 'Nth match out of M' at every search (index of match+total # matches)
cometsong/minibufexpl.vim
Elegant buffer explorer - takes very little screen space
cometsong/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
cometsong/NGS_wrapper_scripts
NGS wrapper scripts written to simplify running NGS analysis programs.
cometsong/simplefold.vim
Fork of SimpleFold.vim by Mauricio Fernandez. Space-optimized, configurable code folding for vim.
cometsong/autocomplpop.vim
A git copy of vim-autocomplpop so I can submodule it. (http://www.vim.org/scripts/script.php?script_id=1879) (https://bitbucket.org/ns9tks/vim-autocomplpop/)
cometsong/bcbio-nextgen
Best-practice pipelines for fully automated high throughput sequencing analysis
cometsong/civet
cometsong/cometsong.github.com
The Pages of All Cool Times
cometsong/django-databrowse
Databrowse is a Django application that lets you browse your data.
cometsong/django-import-export
Django application and library for importing and exporting data with admin integration.
cometsong/django-mysql
:dolphin: :horse: Extensions to Django for use with MySQL/MariaDB
cometsong/django-suit
Modern theme for Django admin interface
cometsong/fadapa
FAstqc DAta PArser - A minimal parser to parse FastQC output data.
cometsong/ln-tree
Create softlinks of all files in one path into another. (e.g. ln /usr/local/APP /usr/local/)
cometsong/Miraculous
MIRAculous is a graphical interface for the sequence assembler MIRA.
cometsong/osdf-python
A Python OSDF (Open Science Data Framework) client
cometsong/otu_db
Store results of 16S OTU clsuters to track and compare and analyze.
cometsong/prokka
Rapid prokaryotic genome annotation
cometsong/qinx
qstat Info from full XML output, parseable by job owner or job name, etc.
cometsong/quact_db_mbiome
QuaCT :: Quality Control Tracking DB, for Sequencer Runs and Samples
cometsong/scratch.vim
Plugin to create and use a scratch Vim buffer
cometsong/symlinks
symbolic link maintenance utility
cometsong/VisIncr.vim
Dr. Chip's VisIncr and CalUtil plugins combined