conghaowang/Drug_Response_Prediction

"# Drug_Response_Prediction" "# Drug_Response_Prediction"

Flow of codes and project:

1. preprocessing_updated_data.ipynb
   • Preprocessing of omics data into matrices
2. pca_6_datasets.ipynb
   • Conduct PCA on omics data matrices
3. dnn_preprocessing.ipynb
   • Preparing input data for input DNN (Append drug response to data etc...)
4. combined_data.ipynb
   • Preparing input data for combined DNN
5. datasets.py
   • Read data
6. model.py
   • Specifications of model
7. main.py
   • Individual DNN
8. main_combined.py
   • Comined DNN