Pinned Repositories
ActiveDriverWGSR
ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
ATAC_seq_practice
chip-seq-pipeline2
ENCODE ChIP-seq pipeline
DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
DMRichR
An executable and package for the statistical analysis and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
DNA-methylation-analysis
DNA methylation analysis notes from Ming Tang
DriverPower
DriverPower
dUMR
differentially Under Methylated Regions among normal tissues and pan-cancers
PredictDBPipeline
RecurrentMutationStats
This contains code for statistical analysis of recurrent mutations in whole genome sequencing data.
corner0426's Repositories
corner0426/PredictDBPipeline
corner0426/RecurrentMutationStats
This contains code for statistical analysis of recurrent mutations in whole genome sequencing data.
corner0426/ActiveDriverWGSR
ActiveDriverWGSR is an R package for discovery of cancer driver genes and non-coding elements in whole genome sequencing data
corner0426/ATAC_seq_practice
corner0426/chip-seq-pipeline2
ENCODE ChIP-seq pipeline
corner0426/DCC
DCC uses output from the STAR read mapper to systematically detect back-splice junctions in next-generation sequencing data. DCC applies a series of filters and integrates data across replicate sets to arrive at a precise list of circRNA candidates.
corner0426/DMRichR
An executable and package for the statistical analysis and visualization of differentially methylated regions (DMRs) from CpG count matrices (Bismark cytosine reports)
corner0426/DNA-methylation-analysis
DNA methylation analysis notes from Ming Tang
corner0426/DriverPower
DriverPower
corner0426/dUMR
differentially Under Methylated Regions among normal tissues and pan-cancers
corner0426/enhancer-gene-vis
A tool for visualizing ABC enhancer-gene connections in the context of genetic variants.
corner0426/ESCC-MEI-EPIGENETICS
corner0426/gencode_regions
Extract 3'UTR, 5'UTR, CDS, Promoter, Genes, Introns, Exons from GTF files
corner0426/Mechine-learning-in-action
corner0426/methylKit
R package for DNA methylation analysis
corner0426/methylseq
Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel
corner0426/Non-coding-Somatic-Mutations-in-OvCa
corner0426/Noncoding-tumor-mutation-paper
corner0426/PrediXcan
PrediXcan Project
corner0426/prediXcan-post-analysis
corner0426/python-scripts-collections
corner0426/scRNA.seq.course
corner0426/scRNA.seq.course-1
Analysis of single cell RNA-seq data course
corner0426/single-cell-sequencing
corner0426/SX_WGS_predictDB
A record for creating SX gene expression inputation models
corner0426/Wechat-article
corner0426/YYH_notebook