Cosmo

Pinned Repositories

cosmo
Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.
Language:C++5117
KMC
Fast and frugal disk based k-mer counter
Language:C++10
e_coli6
Convenience repo for a collection of 6 reference genomes for E. coli strains.
Language:Shell01
cosmo-issues
Issue repository for Cosmo (separate until we can transfer issues between repositories nicely - ignore code)
Language:C++00
sdsl-lite
Succinct Data Structure Library 2.0
Language:C++00
stxxl
STXXL: Standard Template Library for Extra Large Data Sets
Language:C++00
tclap
Copy of now defunct https://github.com/eile/tclap with latest commit used by VARI-merge
Language:C++00
cosmo-team.github.io
Language:CSS00

Cosmo's Repositories

cosmo-team/cosmo
Cosmo is a fast, low-memory DNA assembler using a Succinct (variable order) de Bruijn Graph.
Language:C++51 7 1817
cosmo-team/KMC
Fast and frugal disk based k-mer counter
Language:C++1
cosmo-team/cosmo-issues
Issue repository for Cosmo (separate until we can transfer issues between repositories nicely - ignore code)
Language:C++
cosmo-team/cosmo-team.github.io
Language:CSS
cosmo-team/e_coli6
Convenience repo for a collection of 6 reference genomes for E. coli strains.
Language:Shell1
cosmo-team/sdsl-lite
Succinct Data Structure Library 2.0
Language:C++2 0
cosmo-team/stxxl
STXXL: Standard Template Library for Extra Large Data Sets
Language:C++
cosmo-team/tclap
Copy of now defunct https://github.com/eile/tclap with latest commit used by VARI-merge
Language:C++