cpavanrun

cpavanrun's Stars

• princessmaximacenter/network-filesystem-shares

  Repository of nfs4_share. This program uses NFSv4-mount properties to share data with other users that have access to the mount. It prevent data duplication and makes keeping track of permissions relatively easy.

  Language:Python53

• thehyve/python_csr2transmart

  Scripts for converting CSR data to TranSMART

  Language:Python33

• thehyve/pmc-conversion

  Data extraction, transformation and loading pipeline for the Princess Maxima Center

  Language:Python2

• broadinstitute/cromwell-tools

  A collection of Python clients and accessory scripts for interacting with the Cromwell

  Language:Python229

• LUMC/pytest-workflow

  Configure workflow/pipeline tests using yaml files.

  Language:Python639

• molgenis/molgenis-tools-emx-downloader

  Stand alone tool to download data in EMX format from molgenis servers

  Language:Java28

• broadinstitute/cromwell

  Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments

  Language:Scala987357

• MultiQC/MegaQC

  Web application to collect and visualise data across multiple MultiQC runs.

  Language:Python9428

• MultiQC/test-data

  Test data for MultiQC.

  Language:HTML19142

• MultiQC/MultiQC

  Aggregate results from bioinformatics analyses across many samples into a single report.

  Language:JavaScript1.2k595